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Template Laboratory Isolate Organizer 2008‑08‑08

Id1.3.6.1.4.1.19376.1.3.1.5
ref
XDLAB-
Effective Date2008‑08‑08
Statusactive ActiveVersion Label2017
NameLaboratoryIsolateOrganizerDisplay NameLaboratory Isolate Organizer
Description
en-US The Laboratory Isolate Organizer SHALL be used only if the entry represents a microbiology specimen study with isolates discovered on the specimen. The isolate is represented by the Isolate role played by the Isolate entity. The isolate identification is carried by the code attribute of the Isolate entity.
ContextParent nodes of template element with id 1.3.6.1.4.1.19376.1.3.1.5
ClassificationCDA Entry Level Template
Open/ClosedOpen (other than defined elements are allowed)
Used by / Uses
Used by 1 transaction and 7 templates, Uses 8 templates
Used by as NameVersion
1.3.6.1.4.1.19376.1.5.3.1.4.11Transactiondraft en-US IHE Immunization Content2017‑03‑30 09:28:26
1.3.6.1.4.1.19376.1.3.1Containmentactive Laboratory Report Data Processing Entry (2017)2008‑08‑08
1.3.6.1.4.1.19376.1.3.1Containmentdraft BC Laboratory Report Data Processing Entry2016‑04‑05 01:31:43
1.3.6.1.4.1.19376.1.3.3linkactive Sharing Laboratory Reports (XD-LAB) Content Module (2017)2016‑07‑05
1.3.6.1.4.1.19376.1.3.3.2.1linkactive Laboratory Specialty Section (2017)2008‑08‑08
1.3.6.1.4.1.19376.1.3.3.2.2linkactive Laboratory Report Item Section (2017)2008‑08‑08
1.3.6.1.4.1.19376.1.5.3.1.1.18.1.2linkactive IHE Immunization Content Specification (2016)2017‑03‑20 09:59:31
2.16.840.1.113883.3.1937.99.61.41.10.27Containmentdraft Laboratory Report Data Processing Entry_Sandbox-sm (2017)2019‑03‑27 16:09:06
Uses as NameVersion
1.3.6.1.4.1.19376.1.3.1.4Containmentactive Laboratory Battery Organizer (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.1.6Containmentactive Laboratory Observation (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.3.1.2.1Containmentactive Non-Human Subject (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.3.1.3.1Containmentactive Human Patient with Non-Human Subject (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.3.1.7Containmentactive Laboratory Performer (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.10.9.2Includeactive Multimedia Embedded Content (2017)DYNAMIC
1.3.6.1.4.1.19376.1.3.10.9.17Containmentactive Author with Name, Addr, Telecom (2017)DYNAMIC
1.3.6.1.4.1.19376.1.5.3.1.4.2Containmentactive IHE Comment Entry (2014)DYNAMIC
RelationshipSpecialization: template 2.16.840.1.113883.10.12.303 CDA Observation (2005‑09‑07)
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ad1bbr-
Example
Laboratory Isolate Organizer Example
<organizer classCode="CLUSTER" moodCode="EVN">
  <templateId root="1.3.6.1.4.1.19376.1.3.1.5"/>  <statusCode code="completed"/>  <effectiveTime value="20071108000000.0000-0500"/>  <specimen typeCode="SPC">
    <specimenRole classCode="ISLT">
      <id extension="55584739" root="1.3.6.1.4.1.19376.1.3.4"/>      <specimenPlayingEntity classCode="MIC">
        <code code="79153007" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT" displayName="Salmonella tennessee 6,7,14;z29;1,2,7"/>      </specimenPlayingEntity>
    </specimenRole>
  </specimen>
  <performer typeCode="PRF">
    <templateId root="1.3.6.1.4.1.19376.1.3.3.1.7"/>    <!-- .. -->
  </performer>
  <author typeCode="AUT"> ... </author>  <participant typeCode="AUTHEN">
    <templateId root="1.3.6.1.4.1.19376.1.3.3.1.5"/>    <!-- .. -->
  </participant>
  <participant typeCode="RESP">
    <!-- .. -->
  </participant>
  <participant typeCode="DEV">
    <!-- .. -->
  </participant>
  <component>
    <observation classCode="OBS" moodCode="EVN">
      <templateId root="1.3.6.1.4.1.19376.1.3.1.6"/>      <code code="89029-0" codeSystem="2.16.840.1.113883.6.1" codeSystemName="LOINC" displayName="Microbiology Culture"/>      <!-- .. -->
    </observation>
  </component>
</organizer>
ItemDTCardConfDescriptionLabel
hl7:organizer
Labodotsizer
@classCode
cs1 … 1FCLUSTER
@moodCode
cs1 … 1FEVN
hl7:templateId
II1 … 1MLabodotsizer
@root
uid1 … 1F1.3.6.1.4.1.19376.1.3.1.5
hl7:id
II0 … 1Ren-US The Isolate MAY have a unique identifier from within the laboratory.Labodotsizer
hl7:code
CD0 … 1en-US The <code> element SHALL identify the Isolate with a unique international vocabulary. The code, codeSystem, and displayName SHALL be present. You MAY also populate codeSystemName.Labodotsizer
hl7:statusCode
CS1 … 1Men-US ‘completed’ when all expected results for this isolate are in a final state
‘active’ if some are missing
‘aborted’ if the findings on the isolate did not reach completion. Some results MAY be there.
Labodotsizer
 CONF
@code shall be "completed"
or
@code shall be "active"
or
@code shall be "aborted"
hl7:effectiveTime
TS0 … 1Ren-US Time of results on this isolate.Labodotsizer
Choice … 1Elements to choose from:
hl7:subject
0 … 1en-US subject in case of a non-human subject attached to the isolate
Contains 1.3.6.1.4.1.19376.1.3.3.1.2.1 Non-Human Subject (DYNAMIC)
Labodotsizer
@typeCode
cs0 … 1FSBJ
hl7:subject
0 … 1en-US subject in case of a non-human subject attached to the isolate
Contains 1.3.6.1.4.1.19376.1.3.3.1.3.1 Human Patient with Non-Human Subject (DYNAMIC)
Labodotsizer
@typeCode
cs0 … 1FSBJ
hl7:specimen
1 … 1en-US participation of the isolate i.e. the specific sub-specimen on which a microorganism was isolated and cultivatedLabodotsizer
@typeCode
cs0 … 1FSPC
hl7:specimenRole
1 … 1Labodotsizer
@classCode
cs0 … 1FSPEC
hl7:id
II0 … 1en-US unique identifier for this isolate, known to the laboratoryLabodotsizer
hl7:specimenPlayingEntity
1 … 1en-US The entity is a microorganismLabodotsizer
@classCode
cs1 … 1FMIC
hl7:code
CE1 … 1en-US Identification of the microorganism, in a standard vocabularyLabodotsizer
hl7:performer
0 … *en-US performer participation used if specific performer on this isolate, to supersede all performers of higher level.
Contains 1.3.6.1.4.1.19376.1.3.3.1.7 Laboratory Performer (DYNAMIC)
Labodotsizer
hl7:author
0 … *en-US author participation used if specific author on this isolate, to supersede all authors of higher level.
Contains 1.3.6.1.4.1.19376.1.3.10.9.17 Author with Name, Addr, Telecom (DYNAMIC)
Labodotsizer
hl7:participant
0 … *en-US Other participants "AUTHEN", "RESP", and "DEV".
  • AUTHEN: The verifier of the battery organizer. In the case where a laboratory report has multiple verifiers. Each verifier is attached to the subset of batteries/observations he or she verified, by the means of a <participant> element.
Labodotsizer
where [@typeCode='AUTHEN']
@typeCode
cs1 … 1FAUTHEN
hl7:participant
0 … *en-US Other participants "AUTHEN", "RESP", and "DEV".
  • RESP: The person responsible for the provision of the battery. In the case where this battery is subcontracted to an external laboratory, this external laboratory (with its address and telcom) and the actual performer is represented by a <performer> element, whereas the Director of this subcontractor laboratory is carried by the <participant> element being attached to the same level as the <performer> element.
Labodotsizer
where [@typeCode='RESP']
@typeCode
cs1 … 1FRESP
hl7:participant
0 … *en-US Other participants "AUTHEN", "RESP", and "DEV".
  • DEV: A device or equipment, which was used to produce this battery of results (e.g. an analyzer).
Labodotsizer
where [@typeCode='DEV']
@typeCode
cs1 … 1FDEV
hl7:component
0 … *RContains 1.3.6.1.4.1.19376.1.3.1.4 Laboratory Battery Organizer (DYNAMIC)Labodotsizer
@typeCode
cs0 … 1FCOMP
hl7:component
0 … *RContains 1.3.6.1.4.1.19376.1.3.1.6 Laboratory Observation (DYNAMIC)Labodotsizer
@typeCode
cs0 … 1FCOMP
hl7:component
0 … *RLabodotsizer
@typeCode
cs0 … 1FCOMP
Included from 1.3.6.1.4.1.19376.1.3.10.9.2 Multimedia Embedded Content (DYNAMIC)
hl7:observationMedia
Multdotstent
@classCode
cs1 … 1FOBS
@moodCode
cs1 … 1FEVN
hl7:value
1 … 1MMultdotstent
@mediaType
cs1 … 1R
 CONF
@mediaType shall be "image/gif"
or
@mediaType shall be "image/jpeg"
or
@mediaType shall be "image/png"
or
@mediaType shall be "image/bmp"
@representation
cs1 … 1FB64
hl7:component
0 … *RContains 1.3.6.1.4.1.19376.1.5.3.1.4.2 IHE Comment Entry (DYNAMIC)Labodotsizer
@typeCode
cs0 … 1FCOMP
 Schematron assertrolered error 
 testhl7:component 
 MessageSpecimenObservationCluster _Organizer SHALL contain at least one of Battery, Observation, Multimedia or Annotation comment.