Id2.16.840.1.113883.10.20.20.2.1.1.1Effective Date2013‑02‑01
Statusdraft DraftVersion Label
NameGeneticVariationAssociatedObservationAminoAcidChangeTypeDisplay NameGenetic Variation Associated Observation Amino Acid Change Type
DescriptionThe GeneticVariationAssociatedObservationAminoAcidChangeType template is a sub-template of GenomicAssociatedObservation and is used to carry the amino acid change type of that genetic variation.
ContextParent nodes of template element with id 2.16.840.1.113883.10.20.20.2.1.1.1
ClassificationCDA Entry Level Template
Open/ClosedOpen (other than defined elements are allowed)
Used by / Uses
Used by 0 transactions and 2 templates, Uses 0 templates
Used by as NameVersion
2.16.840.1.113883.2.6.60.13.10.3Containmentdraft Clinical Genomic Statement Genetische Variation2018‑08‑27 16:23:50
2.16.840.1.113883.10.20.20.2.1Containmentdraft Clinical Genomic Statement Genetic Variation2013‑02‑01
RelationshipSpecialization: template 2.16.840.1.113883.10.12.303 CDA Observation (2005‑09‑07)
ref
ad1bbr-

Specialization: template 2.16.840.1.113883.10.20.20.4 Genomic Associated Observation (DYNAMIC)
Example
Example
<observation classCode="OBS" moodCode="EVN">
  <templateId root="2.16.840.1.113883.10.20.20.2.1.1.1"/>  <code code="48006-1" codeSystemName="LOINC" displayName="Amino acid change type"/>  <value xsi:type="CD" code="LA6698-0" displayName="Missense"/></observation>
ItemDTCardConfDescriptionLabel
hl7:observation
GenedotsType
@classCode
cs0 … 1FOBS
@moodCode
cs0 … 1FEVN
 Constraint
SHALL satisfy: Either "DNA Change Type" observation or "Amino Acid Change Type" observation is required
but both may be specified.
hl7:templateId
II1 … 1MGenedotsType
@root
uid1 … 1F2.16.840.1.113883.10.20.20.2.1.1.1
hl7:code
CD1 … 1RGenedotsType
 ConstraintCONF-GTR-60
@code
CONF0 … 1F48006-1
@codeSystem
0 … 1F2.16.840.1.113883.6.1
@displayName
0 … 1FAmino acid change type
hl7:value
CD0 … 1RGenedotsType
 ConstraintMAY contain zero or one [0..1] value with data type CD (CONF-GTR-61)
  • GTR ClinicalGenomicStatementGeneticVariationAminoAcidChange (self) SHALL satisfy: If self.code@code=48006-1 (LOINC code for Amino acid change type), then self.value@code SHALL be drawn from the LOINC Value Set 2.16.840.1.113883.10.20.20.9.2 (Amino acid change type: 48006-1) (CONFGTR-59)
 CONF
The value of @code shall be drawn from value set 2.16.840.1.113883.10.20.20.9.2 Amino acid change type (2013‑02‑01)