Id2.16.840.1.113883.10.20.20.2.3Effective Date2013‑02‑01
Statusdraft DraftVersion Label
NameClinicalGenomicStatementGeneExpressionDisplay NameClinical Genomic Statement Gene Expression
Description
The ClinicalGenomicStatementGeneExpression template is a sub-template of ClinicalGenomicStatement. It is used by TestDetailsSection (through ClinicalGenomicStatement) to carry structured data unique to Gene Expression.

Note: This template is less developed than the genetic variation and cytogenetics templates, due to the rapid developments in the field of gene expression. Nevertheless, as much as possible it is recommended to use coded entries, that is, commonly-used codes in the gene expression field should be assigned to the code and value attributes of this template and its associated templates.
ContextParent nodes of template element with id 2.16.840.1.113883.10.20.20.2.3
ClassificationCDA Entry Level Template
Open/ClosedOpen (other than defined elements are allowed)
Used by / Uses
Used by 0 transactions and 0 templates, Uses 3 templates
Uses as NameVersion
2.16.840.1.113883.10.20.20.2.5.2Containmentdraft Interpretive Phenotype Gene ExpressionDYNAMIC
2.16.840.1.113883.10.20.20.2.5.4.1Containmentdraft Interpretive Phenotype Pharmacogenomic Drug EfficacyDYNAMIC
2.16.840.1.113883.10.20.20.2.5.4.2Containmentdraft Interpretive Phenotype Pharmacogenomic Drug MetabolismDYNAMIC
RelationshipSpecialization: template 2.16.840.1.113883.10.12.303 CDA Observation (2005‑09‑07)
ref
ad1bbr-

Specialization: template 2.16.840.1.113883.10.20.20.2 Clinical Genomic Statement (DYNAMIC)
Example
Example
<observation classCode="OBS" moodCode="EVN">
  <templateId root="2.16.840.1.113883.10.20.20.2.3"/>  <id root="2.16.840.1.113883.18.12.7.30.9.8.1"/>  <code code="TBD" displayName="Gene expression analysis"/>  <statusCode code="completed"/>  <effectiveTime value="200512011500"/>  <entryRelationship typeCode="SUBJ">
    <observation classCode="OBS" moodCode="EVN">
      <templateId root="2.16.840.1.113883.10.20.20.2.1.5"/>      <code code="48018-6" codeSystemName="LOINC" displayName="Gene Identifier"/>      <value xsi:type="ST">Colon cancer assay oncotypeDX 12 genes</value>    </observation>  </entryRelationship>  <entryRelationship typeCode="SUBJ">
    <observation classCode="OBS" moodCode="EVN">
      <id root="2.16.840.1.113883.18.12.7.30.9.3.7"/>      <code/>    </observation>  </entryRelationship>  <entryRelationship typeCode="RSON">
    <observation classCode="OBS" moodCode="EVN">
      <id root="2.16.840.1.113883.18.12.7.30.9.2.1"/>      <code/>    </observation>  </entryRelationship>  <entryRelationship typeCode="SPRT">
    <observation classCode="OBS" moodCode="DEF">
      <templateId root="2.16.840.1.113883.10.20.20.2.5.2"/>      <code code="TBD" displayName="Gene expression analysis interpretation"/>      <value xsi:type="ST">applicable to stage II colon cancer patients with adenocarcinoma or mucinous carcinoma</value>    </observation>  </entryRelationship></observation>
ItemDTCardConfDescriptionLabel
hl7:observation
Clindotssion
@classCode
cs0 … 1FOBS
@moodCode
cs0 … 1FEVN
hl7:templateId
II1 … 1MClindotssion
@root
uid1 … 1F2.16.840.1.113883.10.20.20.2.3
hl7:code
1 … 1RClindotssion
hl7:value
0 … 1RClindotssion
hl7:entryRelationship
0 … 1Interpretive Phenotype Gene Expression
Contains 2.16.840.1.113883.10.20.20.2.5.2 Interpretive Phenotype Gene Expression (DYNAMIC)		Clindotssion
hl7:entryRelationship
0 … 1Interpretive Phenotype Pharmacogenomic Drug Efficacy
Contains 2.16.840.1.113883.10.20.20.2.5.4.1 Interpretive Phenotype Pharmacogenomic Drug Efficacy (DYNAMIC)		Clindotssion
hl7:entryRelationship
0 … 1Interpretive Phenotype Pharmacogenomic Drug Metabolism
Contains 2.16.840.1.113883.10.20.20.2.5.4.2 Interpretive Phenotype Pharmacogenomic Drug Metabolism (DYNAMIC)		Clindotssion