Draft| Description |
The InterpretivePhenotype template represents interpretations genetic testing finding (results) observations and is part of the Clinical Genomic Statement (CGS) template. It is a parent template for sub-templates that represent interpretations of specific types of genomic observations described in the various parts of the GTR. Optionally, InterpretivePhenotype can be associated with performers of the interpretations (note that these performers could be different than those performing the genetic observations itself). Note that the overall structure of CGS is depicted in chart 5 of the slide deck enclosed in the GTR package. |
| Used by 1 transaction and 5 templates, Uses 0 templates | ||||||||||||||||||||||||||||
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| Example |
| <observation classCode="OBS" moodCode="DEF"> <templateId root="2.16.840.1.113883.10.20.20.2.5.3"/> <code code="53037-8" codeSystemName="LOINC" displayName="Genetic disease sequence variation interpretation"/> <value xsi:type="CD" code="LA6668-3" codeSystemName="LOINC" displayName="Pathogenic"/></observation> |
| Item | DT | Card | Conf | Description | Label |
|---|---|---|---|---|---|
| hl7:observation | Inte type | ||||
| @classCode | cs | 0 … 1 | F | OBS | |
| @moodCode | cs | 0 … 1 | F | DEF | |
| hl7:templateId | II | 1 … 1 | M | Intetype | |
| @root | uid | 1 … 1 | F | 2.16.840.1.113883.10.20.20.2.5 | |
| hl7:code | 1 … 1 | R | The code attribute should identify the type of interpretation, preferably drawn from internationally-recognized terminologies relevant to the type of interpretation at stake. | Intetype | |
| hl7:value | 0 … 1 | R | The value attribute should represent the interpretation and be aligned with the code attribute; it should preferably be drawn from internationally-recognized terminologies relevant to the type of interpretation at stake. | Intetype | |
| hl7:methodCode | 0 … * | R | The method code attribute relates to the method by whcih the interpretation of the genomic observation/finding has been performed (e.g., designation of a specific algorithm). | Intetype | |
| hl7:effectiveTime | 0 … 1 | R | The effective time attribute relates to the time at whcih the interpretation of the genomic observation/finding has been performed. | Intetype | |
| hl7:performer | 0 … * | R | Use this performer association if the performer(s) of the interpretation are different than the performer(s) indicated at a higher level (i.e., at the clinical genomic statement in a specific test details section or at the GTR header level). | Intetype | |
| Constraint | Contains exactly one [1..1] CDA Performer2 | ||||